Publications
Nugiel, T., Fogleman, N.D., Sheridan, M.A. & Cohen, J.R. (in press). Methylphenidate stabilizes dynamic brain network organization during tasks probing attention and reward processing in stimulant-naïve children with ADHD. Translational Psychiatry. [PDF]
Frye, N.G., Nugiel, T., Alvarez, G., Prinstein, M.J., Cohen, J.R., Telzer, E.H. & Lindquist, K.A. (2025). Functional organization of the allostatic interoceptive network in adolescence: links to peer victimization and prospective depressive symptoms. Developmental Cognitive Neuroscience, 76, 101621. [PDF]
Pollak, O.H., Frye, N.G., Nugiel, T., Cohen, J.R., Telzer, E.H., Lindquist, K.A. & Prinstein, M.J. (2025). Testing an interpersonal risk pathway to suicidal ideation in adolescence: linking neural, psychological, and sociometric indices of socially-relevant factors. Social Cognitive and Affective Neuroscience, 20(1), nsaf087. [PDF]
Bissett, P.G., Achyutuni, K.G., Li, J.K., Jones, H.M., Shim, S., Rios, J.A.H., Bennett, L.J., Mitchell, M., Jackson, J., Bar Or, M., Roll, D., Meidan, N., Saliy-Grigoryan, A., Drummond, T.M.L., Pokala, S.S., Cohen, J.R., Schonberg, T. & Poldrack, R.A. (2025). Arbitrary stimuli are not devalued by stopping action: a registered replication of Wessel et al. (2014). Journal of Experimental Psychology: General, 154(11), 2935-2943. [PDF]
Davis, M.M., Woodburn, M., Nugiel, T., Rakesh, D., Tate, M., Asciutto, W., Lin, W., Cohen, J.R. & Sheridan, M.A. (2025). Longitudinal associations between birth-to-six cortical growth and childhood neurocognitive function. Proceedings of the National Academy of Sciences of the United States of America, 122(22), e2418176122. [PDF]
Yin, W., Li, T., Wu, Z., Hung, S.-H., Hu, D., Gui, Y., Cho, S., Sun, Y., Woodburn, M.A.*, Wang, L., Li, G., Piven, J., Elison, J.T., Wu, C.W., Zhu, H., Cohen, J.R., Lin, W. & UNC/UMN Baby Connectome Project Consortium (2025). Charting brain functional development from birth to 6 years of age. Nature Human Behaviour, 9, 1246-1259. [PDF]
Michael, C., Mitchell, M.E., Cascone, A.D., Fogleman, N.D., Rosch, K.S., Cutts, S.A., Pekar, J.J., Sporns, O., Mostofsky, S.H. & Cohen, J.R. (2025). Reconfiguration of functional brain network organization and dynamics with changing cognitive demands in children with attention-deficit/hyperactivity disorder. Biological Psychiatry: Cognitive Neuroscience and Neuroimaging, 10(8), 846-855. [PDF]
Kong, R., Spreng, R.N., Xue, A., Betzel, R.F., Cohen, J.R., Damoiseaux, J.S., De Brigard, F., Eickhoff, S.B., Fornito, A., Gratton, C., Gordon, E.M., Holmes, A.J., Laird, A.R., Larson-Prior, L., Nickerson, L.D., Pinho, A.L., Razi, A., Sadaghiani, S., Shine, J.M., Yendiki, A., Yeo, B.T.T. & Uddin, L.Q. (2025). A network correspondence toolbox for quantitative evaluation of novel neuroimaging results. Nature Communications, 16(1), 2930. [PDF]
Alvarez, G.M., Jolink, T.A., West, T.N., Cardenas, M.N., Feldman, M.J., Cohen, J.R. & Muscatell, K.A. (2025). Differential effects of social versus monetary incentives on inhibitory control under acute inflammation. Brain, Behavior, and Immunity, 123, 950-964. [PDF]
Rudolph, M.D., Cohen, J.R. & Madden, D.J. (2024). Distributed associations among white matter hyperintensities and structural brain networks with fluid cognition in healthy aging. Cognitive, Affective, & Behavioral Neuroscience, 24(6), 1121-1140. [PDF]
Al-Khalil, K., Bell, R.P., Towe, S.L., Cohen, J.R., Gadde, S., Mu, J., Hall, S.A. & Meade, C.S. (2024). Hub disruption in HIV disease and cocaine use: a connectomics analysis of brain function. Journal of Drug and Alcohol Dependence, 263, 112416. [PDF]
Bell, R.P., Cohen, J.R., Towe, S.L., Gadde, S., Al-Khalil, K., Costello, A., Song, A.W. & Meade, C.S. (2024). Chronic cannabis use associated with subcortical topological reorganization of structural connectivity in adults. Drug and Alcohol Dependence, 262, 111405. [PDF]
Madden, D.J., Merenstein, J.L., Mullin, H.A., Jain, S., Rudolph, M.D. & Cohen, J.R. (2024). Age-related differences in resting-state, task-related, and structural brain connectivity: graph theoretical analyses and visual search performance. Brain Structure and Function, 229(7), 1533-1559. [PDF]
Cascone, A.D., Calabro, F., Foran, W., Larsen, B., Nugiel, T., Parr, A.C., Tervo-Clemmens, B., Luna, B. & Cohen, J.R. (2023). Brain tissue iron neurophysiology and its relationship with the cognitive effects of dopaminergic modulation in children with and without ADHD. Developmental Cognitive Neuroscience, 63, 101274. [PDF]
Uddin, L.Q., Betzel, R.F., Cohen, J.R., Damoiseaux, J.S., De Brigard, F., Eickhoff, S.B., Fornito, A., Gratton, C., Gordon, E.M., Laird, A.R., Larson-Prior, L., McIntosh, A.R., Nickerson, L.D., Pessoa, L., Pinho, A.L., Poldrack, R.A., Razi, A., Sadaghiani, S., Shine, J.M., Yendiki, A., Yeo, B.T.T. & Spreng, R.N. (2023). Controversies and current progress on large-scale brain network nomenclature from OHBM WHATNET: Workgroup for HArmonized Taxonomy of NETworks. Network Neuroscience, 7(3), 864-905. [PDF]
McNeish, D., Bauer, D.J., Dumas, D., Clements, D.H., Cohen, J.R., Lin, W., Sarama, J. & Sheridan, M.A. (2023). Modeling individual differences in the onset and offset of trajectories of change over time. Psychological Methods, 28(2), 401-421. [PDF]
Henry, T.R., Fogleman, N.D., Nugiel, T. & Cohen, J.R. (2022). Effect of methylphenidate on functional controllability: a preliminary study in medication-naïve children with ADHD. Translational Psychiatry, 12, 502. [PDF]
Yin, W., Li, T., Mucha, P.J., Cohen, J.R., Zhu, H., Zhu, Z. & Lin, W. (2022). Altered neural flexibility in children with attention-deficit/hyperactivity disorder. Molecular Psychiatry, 27, 4673-4679. [PDF]
Kaiser, A., Broeder, C., Cohen, J.R., Douw, L., Reneman, L. & Schrantee, A. (2022). Effects of a single-dose methylphenidate challenge on resting-state functional connectivity in stimulant-treatment naïve children and adults with ADHD. Human Brain Mapping, 43(15), 4664-4675. [PDF]
Alvarez, G.M., Rudolph, M.D., Cohen, J.R. & Muscatell, K.A. (2022). Lower socioeconomic position is associated with greater activity and integration within an allostatic-interoceptive brain network in response to affective stimuli. Journal of Cognitive Neuroscience, 34(10), 1906-1927. [PDF]
Muscatell, K.A., Merritt, C.M., Cohen, J.R., Chang, L. & Lindquist, K.L (2022). The stressed brain: neural underpinnings of social stress processing in humans. Current Topics in Behavioral Neurosciences, 54, 373-392. [PDF]
Cohen, J.R. & D’Esposito, M. (2021). An integrated, dynamic functional connectome underlies intelligence. In A.K. Barbey, S. Karama & R.J. Haier (Eds.), The Cambridge Handbook of Intelligence and Cognitive Neuroscience (pp. 261-281). Cambridge: Cambridge University Press. [PDF]
Duffy, K.A., Rosch, K.S., Nebel, M.B., Seymour, K.E., Lindquist, M.A., Pekar, J.J., Mostofsky, S.H. & Cohen, J.R. (2021). Increased integration between default mode and task-relevant networks in children with ADHD is associated with impaired response control. Developmental Cognitive Neuroscience, 50:100980. [PDF]
Woodburn, M.A., Bricken, C.L., Wu, Z., Li, G., Wang, L., Lin, W., Sheridan, M.A. & Cohen, J.R. (2021). The maturation and cognitive relevance of structural brain network organization from early infancy to childhood. Neuroimage, 238, 118232. [PDF]
Shappell, H., Duffy, K.A., Rosch, K.S., Pekar, J.J., Mostofsky, S.H., Lindquist, M.A. & Cohen, J.R. (2021). Children with attention-deficit/hyperactivity disorder spend more time in hyperconnected network states and less time in segregated network states as revealed by dynamic functional connectivity analysis. Neuroimage, 229, 117753. [PDF]
Duffy, K.A., Fisher, Z.F., Arizmendi, C.A., Molenaar, P.C.M., Hopfinger, J, Cohen, J.R., Beltz, A.M., Lindquist, M.A., Hallquist, M.N. & Gates, K.M. (2021). Detecting task-dependent functional connectivity in GIMME with person-specific hemodynamic response functions. Brain Connectivity, 11(6), 418-429. [PDF]
Eichenbaum, A., Pappas, I., Lurie, D., Cohen, J.R.° & D’Esposito, M.° (2021). Differential contributions of static and time-varying functional connectivity to human behavior. Network Neuroscience, 5(1), 145-165. [PDF]
Furlong, S.F., Cohen, J.R., Hopfinger, J., Snyder, J., Robertson, M.M. & Sheridan, M.S. (2021). Resting-state EEG connectivity in young children with ADHD. Journal of Clinical Child & Adolescent Psychology, 50(6), 746-762. [PDF]
Madden, D., Jain, S., Monge, Z.A., Cook, A.D., Lee, A., Huang, H., Howard, C.M. & Cohen, J.R. (2020). Influence of structural and functional brain connectivity on age-related differences in fluid cognition. Neurobiology of Aging, 96, 205-222. [PDF]
Yin, W., Li, T., Hung, S-C., Zhang, H., Wang, L., Shen, D., Zhu, H., Mucha, P.J., Cohen, J.R. & Lin, W. (2020). The emergence of a functionally flexible brain during early infancy. Proceedings of the National Academy of Sciences of the United States of America, 117(38), 23904-23913. [PDF]
Sadler, J.R., Shearrer G.E., Acosta, N.T., Papantoni, A., Cohen, J.R., Small, D.M., Park, S.Q., Gordon-Larsen, P. & Burger, K.S. (2020). Network organization during probabilistic learning via taste outcomes. Physiology and Behavior, 223, 112984. [PDF]
Henry, T.R., Duffy, K.A., Rudolph, M.D., Nebel, M.B., Mostofsky, S.H. & Cohen, J.R. (2020). Bridging global and local topology in whole-brain networks using the network statistic jackknife. Network Neuroscience, 4(1), 70-88. [PDF]
Madden, D., Siciliano, R., Tallman, C., Monge, Z., Voss, A., Cohen, J.R. (2020). Response-level processing during visual feature search: effects of frontoparietal activation and adult age. Attention, Perception, & Psychophysics, 82(1), 330-349. [PDF]
Henry, T.R. & Cohen, J.R. (2019). Dysfunctional brain network organization in neurodevelopmental disorders. In B.C. Munsell and G. Wu (Eds.), Connectomics: Methods, Mathematical Models and Applications (pp. 83-100). Cambridge, MA: Academic Press. [PDF]
Zu, C., Gao, Y., Munsell, B., Kim, M., Peng, Z., Cohen, J.R., Zhang, D. & Wu, G. (2019). Identifying disease-related connectome biomarkers by sparse hypergraph learning. Brain Imaging and Behavior, 13(4), 879-892. [PDF]
Cohen, J.R. (2018). The behavioral and cognitive relevance of time-varying, dynamic changes in functional connectivity. Neuroimage, 180(Pt B), 515-525. [PDF]
Kucyi, A., Tambini, A., Sadaghiani, S., Keilholz, S. & Cohen, J.R. (2018). Spontaneous cognitive processes and the behavioral validation of time-varying brain connectivity. Network Neuroscience, 2(4), 397-417. [PDF]
McCormick, E.M.°, van Hoorn, J.°, Cohen, J.R. & Telzer, E.H. (2018). Functional connectivity in the social brain across childhood and adolescence. Social Cognitive and Affective Neuroscience, 13(8), 819-830. [PDF]
Choe, A.S., Nebel, M.B., Barber, A.D., Cohen, J.R., Xu, Y., Pekar, J.J., Caffo, B. & Lindquist, M.A. (2017). Comparing test-retest reliability of dynamic functional connectivity methods. Neuroimage, 158, 155–175. [PDF]
Cohen, J.R. & D’Esposito, M. (2016). The segregation and integration of distinct brain networks and their relationship to cognition. The Journal of Neuroscience, 36(48), 12083-94. [PDF]
Waltzman, D., Knowlton, B.J., Cohen, J.R., Bookheimer, S.Y., Bilder, R.M. & Asarnow, R.F. (2016). DTI microstructural abnormalities in adolescent siblings of patients with childhood-onset schizophrenia. Psychiatry Research: Neuroimaging, 258, 23-29. [PDF]
Wagshal, D., Knowlton, B.J., Cohen, J.R., Bookheimer, S.Y., Bilder, R.M, Fernandez, V.G. & Asarnow, R.F. (2015). Cognitive correlates of gray matter abnormalities in adolescent siblings of patients with childhood-onset schizophrenia. Schizophrenia Research, 161(2-3), 345-50. [PDF]
Cohen, J.R., Gallen, C.L., Jacobs, E.G., Lee, T.G. & D’Esposito, M. (2014). Quantifying the reconfiguration of intrinsic networks during working memory. PLoS One, 9(9), e106636. [PDF]
Cohen, J.R.°, Sreenivasan, K.K.° & D’Esposito, M. (2014). Correspondence between stimulus encoding- and maintenance-related neural activity underlies successful working memory. Cerebral Cortex, 24(3), 593-9. [PDF]
Wagshal, D., Knowlton, B.J., Cohen, J.R., Poldrack R.A., Bookheimer, S.Y., Bilder R.M. & Asarnow, R.F. (2014). Impaired automatization of a cognitive skill in first-degree relatives of patients with schizophrenia. Psychiatry Research, 215(2), 294-9. [PDF]
Wagshal, D., Knowlton, B.J., Suthana, N.A., Cohen, J.R., Poldrack R.A., Bookheimer, S.Y., Bilder R.M. & Asarnow, R.F. (2014). Evidence for corticostriatal dysfunction during cognitive skill learning in adolescent siblings of patients with childhood-onset schizophrenia. Schizophrenia Bulletin, 40(5), 1030-9. [PDF]
Cohen, J.R., Berkman, E.T. & Lieberman, M.D. (2013). Intentional and incidental self-control in ventrolateral PFC. In D.T. Stuss and R.T. Knight (Eds.), Principles of Frontal Lobe Function: Second Edition, (pp. 417-440). New York: Oxford University Press. [PDF]
Congdon, E., Mumford, J.A., Cohen, J.R., Galvan, A., Canli, T. & Poldrack, R.A. (2012). Measurement and reliability of response inhibition. Frontiers in Psychology, 3, 37. [PDF]
Kirchberg, B.C., Cohen, J.R., Adelsky, M.B., Buthorn, J.J., Gomar, J.J., Gordon, M., Koppel, J., Christen, E., Conejero-Goldberg, C., Davies, P. & Goldberg, T.E. (2012). Semantic distance abnormalities in mild cognitive impairment: Their nature and relationship to function. American Journal of Psychiatry, 169(12), 1275-83. [PDF]
Spunt, R.P., Lieberman, M.D., Cohen, J.R. & Eisenberger, N. I. (2012). The phenomenology of error processing: the dorsal ACC response to stop-signal errors tracks reports of negative affect. Journal of Cognitive Neuroscience, 24(8), 1753-65. [PDF]
Wagshal, D., Knowlton, B.J., Cohen, J.R., Poldrack, R.A., Bookheimer, S.Y., Bilder, R.M., Fernandez, V.G. & Asarnow, R.F. (2012). Deficits in probabilistic classification learning and liability for schizophrenia. Psychiatry Research, 200(2-3), 167-72. [PDF]
Cohen, J.R., Asarnow, R.F., Sabb, F.W., Bilder, R.M., Bookheimer, S.Y., Knowlton, B.J. & Poldrack, R.A. (2011). Decoding continuous variables from neuroimaging data: Basic and clinical applications. Frontiers in Neuroscience, 5, 75. [PDF]
Cohen, J.R., Asarnow, R.F., Sabb, F.W., Bilder, R.M., Bookheimer, S.Y., Knowlton, B.J. & Poldrack, R.A. (2010). A unique adolescent response to reward prediction errors. Nature Neuroscience, 13(6), 669-71. [PDF] [Suppl]
Cohen, J.R., Asarnow, R.F., Sabb, F.W., Bilder, R.M., Bookheimer, S.Y., Knowlton, B.J. & Poldrack, R.A. (2010). Decoding developmental differences and individual variability in response inhibition through predictive analyses across individuals. Frontiers in Human Neuroscience, 4, 47. [PDF]
Cohen, J.R. & Lieberman, M.D. (2010). The common neural basis of exerting self-control in multiple domains. In K. Ochsner & Y. Trope (Eds.), From Society to Brain: The New Sciences of Self-Control, (pp. 141-60). New York: Oxford University Press. [PDF]
Congdon, E., Mumford, J., Cohen, J.R., Galvan, A., Aron, A., Xue, G., Miller, E. & Poldrack, R. A. (2010). Engagement of large-scale networks is related to individual differences in inhibitory control. NeuroImage,53(2), 653-63. [PDF] [Suppl]
Cohen, J.R. & Poldrack, R.A. (2008). Automaticity in motor sequence learning does not impair response inhibition. Psychonomic Bulletin and Review, 15(1), 108-15. [PDF]
Blasi, G., Goldberg, T.E., Elvevåg, B., Rasetti, R., Bertolino, A., Cohen, J., Alce, G., Zoltick, B., Weinberger, D.R. & Mattay, V.S. (2007). Differentiating allocation of resources and conflict detection within attentional control processing. European Journal of Neuroscience, 25(2), 594-602. [PDF]
Cohen, J.R., Elvevåg, B. & Goldberg, T.E. (2005). Cognitive control and semantics in schizophrenia: An integrated approach. American Journal of Psychiatry, 162(1), 1969-71. [PDF]
° Indicates equal authorship